Media 000606231: Whole Body
Open Download
Type Volumetric Image Series
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen

Media Display

In Collections

TAGS

No tags found.

GENERAL DETAILS Field Definitions

Media ID
000606231
Media type
Volumetric Image Series
Object element or part
whole body
Object represented
Object taxonomy
Platysternon megacephalum
Side
--
Orientation
--
Short description
--
Full description
--
Creator
Jaimi Gray
Date created
September 07, 2021
Date uploaded
February 19, 2024

FILE OBJECT DETAILS Field Definitions

File name
File format(s)
ZIP archive, TIFF
File size
2.54 GB
Image width
904
Image height
1529
Color space
BlackIsZero
Color depth
16
Compression
PackBits
Series type
Reconstructed image stack
X pixel spacing
0.054314
Y pixel spacing
0.054314
Z pixel spacing
0.054314
Pixel spacing units
Millimeters
Slice thickness
--
Number of images in set
3,103

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
0
Number of processing events
1 (0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
General Electric phoenix v|tome|x m 240, UF Nanoscale Research Facility (University of Florida)

OWNERSHIP AND PERMISSIONS Field Definitions

Data uploaded by
Publication status
Open Download
IP holder
Florida Museum of Natural History, University of Florida
Copyright statement
--
Creative Commons license
--
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
NSF DBI-1701714 ("oVert: TCN" parent grant)
Publisher
--
Cite as
Blackburn, D.C., et al. 2024. Increasing the impact of vertebrate scientific collections through 3D-imaging: the openVertebrate (oVert) Thematic Collections Network. BioScience 74: 169–186. https://doi.org/10.1093/biosci/biad120
Media preview mode
Interactive/Embeddable
Additional usage agreement

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object UF:herp:191750 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device facility
UF Nanoscale Research Facility (University of Florida)
Creator
Jaimi Gray
Event date
September 07, 2021
Software
--
Description
--
Description Attachment
None
Photographic Reference
None
Filter
Cu 0.5 mm
Exposure time
250 ms
Flux normalization
--
Pixel spacing calibration
--
Shading correction
--
Frame averaging
3
Projections
2200
Voltage
100 kV
Power
--
Amperage
200 uA
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000606231: Whole Body [CTImageSeries] [CT] (this media).

Processing Details Field Definitions

Creator
Jaimi Gray
Event date
September 07, 2021
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000606231: Whole Body [CTImageSeries] [CT] (this media)