Media 000420646: Whole Body [CTImageSeries] [CT]
Represents:
Biological Specimen
In Collection

GENERAL DETAILS

Media ID
000420646
Media type
CTImageSeries
Object element or part
whole body
Side
--
Orientation
--
Short description
zipped tiff stack
Full description
microCT volume and derivatives, fluid-preserved herp
Creator
Magallanes, Isaac
Date created
January 26, 2022
Date uploaded
February 09, 2022

FILE OBJECT DETAILS

File format(s)
image/tiff
File size
144 MB
Image width
623
Image height
368
Color space
BlackIsZero
Color depth
16
Compression
PackBits
X pixel spacing
0.064566
Y pixel spacing
0.064566
Z pixel spacing
0.064566
Pixel spacing units
Mm
Slice thickness
--
Number of images in set
1,976

IMAGE ACQUISITION AND PROCESSING AT A GLANCE

Number of parent media
0
Number of processing events
1 (0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
General Electric phoenix v|tome|x s, UChicago PaleoCT (University of Chicago)

OWNERSHIP AND PERMISSIONS

Data managed by
Data uploaded by
Download permission
Publish with Restricted Download
IP holder
Field Museum of Natural History
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On Any Repository
Funding attribution
NSF DBI-1701714; oVert TCN; NSF DBI-1702421
Publisher
--
Cite as
Field Museum of Natural History provided access to these data , the collection of which was funded by oVert TCN. The files were downloaded from www.MorphoSource.org, Duke University.
Media preview mode
Interactive/Embeddable

IDENTIFIERS AND EXTERNAL LINKS

MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object FMNH:Amphibians and Reptiles:165045 was imaged to create undeposited raw media.

Imaging Details

Modality
X-Ray Computed Tomography (CT/microCT)
Device
General Electric phoenix v|tome|x s
Device facility
UChicago PaleoCT (University of Chicago)
Creator
Coldren, Daryl
Date
January 26, 2022
Software
--
Description
--
Imaging event description attachment
None
Imaging event reference attachment
None
Filter
--
Exposure time
0.25
Flux normalization
No
Pixel spacing calibration
--
Shading correction
No
Frame averaging
3
Projections
800
Voltage
110
Power
0.024
Amperage
220
Surrounding material
air
Xray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixel size X
--
Detector pixels Y
--
Detector pixel size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000420646: Whole Body [CTImageSeries] [CT] (this media).

Processing Details

Creator
Magallanes, Isaac
Date processed
January 26, 2022
Software
VGStudio Max 2.0
Description
calibrated histogram to highest and lowest densities, cropped ROI down to the specimen
Description attachment
None

Media produced by this event on MorphoSource


Media 000420646: Whole Body [CTImageSeries] [CT] (this media)